geneplotter

Graphics related functions for Bioconductor

Bioconductor version: Release (2.12)

Some basic functions for plotting genetic data

Author: R. Gentleman, Biocore

Maintainer: Bioconductor Package Maintainer <maintainer at bioconductor.org>

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("geneplotter")

To cite this package in a publication, start R and enter:

    citation("geneplotter")

Documentation

PDF R Script How to assemble a chromLocation object
PDF R Script Visualization of Microarray Data
PDF   Reference Manual
Text   README
Text   NEWS

Details

biocViews Software, Visualization
Version 1.38.0
In Bioconductor since BioC 1.6 (R-1.11) or earlier
License Artistic-2.0
Depends R (>= 2.10), Biobase(>= 2.5.5), annotate, lattice
Imports annotate, AnnotationDbi, Biobase(>= 2.5.5), graphics, grDevices, grid, methods, RColorBrewer, stats, utils
Suggests Biobase(>= 2.5.5), Rgraphviz, annotate, fibroEset, hgu95av2.db, hu6800.db, hgu133a.db
System Requirements
URL
Depends On Me HD2013SGI, HMMcopy
Imports Me biocGraph, DESeq, flowQ, IsoGeneGUI, MethylSeekR, RNAinteract, RNAither
Suggests Me AgiMicroRna, BiocCaseStudies, biocGraph, Category, GOstats, maDB

Package Downloads

Package Source geneplotter_1.38.0.tar.gz
Windows Binary geneplotter_1.38.0.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard) geneplotter_1.38.0.tgz
Package Downloads Report Download Stats

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