lmdme
Linear Model decomposition for Designed Multivariate Experiments
Bioconductor version: Release (2.11)
linear ANOVA decomposition of Multivariate Designed Experiments implementation based on limma lmFit. Features: i) Flexible formula type interface, ii) Fast limma based implementation, iii) p and F values over deflacted coefficients and iv) ploting functions for PCA and PLS
Author: Cristobal Fresno and Elmer A. Fernandez
Maintainer: Cristobal Fresno <cristobalfresno at gmail.com>
To install this package, start R and enter:
source("http://bioconductor.org/biocLite.R")
biocLite("lmdme")
To cite this package in a publication, start R and enter:
citation("lmdme")
Documentation
| R Script | lmdme: linear model framework for PCA/PLS analysis of ANOVA decomposition on Designed Multivariate Experiments in R | |
| Reference Manual | ||
| Text | NEWS |
Details
| biocViews | AssayDomains, Bioinformatics, Cancer, DifferentialExpression, ExperimentData, Microarray, OneChannel, Software, TwoChannel, Visualization |
| Version | 1.0.0 |
| In Bioconductor since | BioC 2.11 (R-2.15) |
| License | GPL (>=2) |
| Depends | R (>= 2.14.1), methods, limma, pls |
| Imports | stats |
| Suggests | stemHypoxia |
| System Requirements | |
| URL | http://200.45.112.41/bdmg/?page_id=38 |
| Depends On Me | |
| Imports Me | |
| Suggests Me |
Package Downloads
| Package Source | lmdme_1.0.0.tar.gz |
| Windows Binary | lmdme_1.0.0.zip (32- & 64-bit) |
| MacOS 10.5 (Leopard) | lmdme_1.0.0.tgz |
| Package Downloads Report | Download Stats |
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