TxDb.Hsapiens.UCSC.hg19.knownGene

Annotation package for TranscriptDb object(s)

Bioconductor version: 2.10

Exposes an annotation databases generated from UCSC by exposing these as TranscriptDb objects

Author: Marc Carlson

Maintainer: Biocore Data Team <bioconductor at r-project.org>

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("TxDb.Hsapiens.UCSC.hg19.knownGene")

To cite this package in a publication, start R and enter:

    citation("TxDb.Hsapiens.UCSC.hg19.knownGene")

Documentation

PDF   Reference Manual

Details

biocViews AnnotationData, Genetics, Homo_sapiens
Depends GenomicFeatures(>= 1.7.30)
Imports GenomicFeatures, AnnotationDbi
Suggests
System Requirements
License Artistic-2.0
URL
Depends On Me cgdv17
Imports Me
Suggests Me AnnotationDbi, biovizBase, ggbio, rtracklayer, VariantAnnotation
Version 2.7.1

Package Downloads

Package Source TxDb.Hsapiens.UCSC.hg19.knownGene_2.7.1.tar.gz
Windows Binary TxDb.Hsapiens.UCSC.hg19.knownGene_2.7.1.zip (32- & 64-bit)
MacOS 10.5 (Leopard) binary TxDb.Hsapiens.UCSC.hg19.knownGene_2.7.1.tgz
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