BSgenome.Alyrata.JGI.v1

DOI: 10.18129/B9.bioc.BSgenome.Alyrata.JGI.v1    

This package is for version 3.9 of Bioconductor; for the stable, up-to-date release version, see BSgenome.Alyrata.JGI.v1.

Arabidopsis lyrata full genome (JGI version V1.0)

Bioconductor version: 3.9

Arabidopsis lyrata 8x Release [project ID 4002920] as provided by JGI ( snapshot from March 24, 2011) and stored in Biostrings objects.

Author: Jian-Feng Mao and Ya-Long Guo, with acknowledgement to Detlef Weigel

Maintainer: Jian-Feng Mao <jianfeng.mao at gmail.com>

Installation

To install this package, start R (version "3.6") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("BSgenome.Alyrata.JGI.v1")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

PDF		Reference Manual

Details

biocViews	Alyrata, AnnotationData, Genetics
Version	1.0.0
License	Artistic-2.0
Depends	BSgenome(>= 1.19.5)
Imports	BSgenome
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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	BSgenome.Alyrata.JGI.v1_1.0.0.tar.gz
Windows Binary
Mac OS X 10.11 (El Capitan)
Package Short Url	https://bioconductor.org/packages/BSgenome.Alyrata.JGI.v1/
Package Downloads Report	Download Stats