geneClassifiers

DOI: 10.18129/B9.bioc.geneClassifiers    

This package is for version 3.9 of Bioconductor; for the stable, up-to-date release version, see geneClassifiers.

Application of gene classifiers

Bioconductor version: 3.9

This packages aims for easy accessible application of classifiers which have been published in literature using an ExpressionSet as input.

Author: R Kuiper

Maintainer: R Kuiper <r.kuiper.emc at gmail.com>

Installation

To install this package, start R (version "3.6") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("geneClassifiers")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("geneClassifiers")

 

PDF		geneClassifiers and missing probesets
PDF	R Script	geneClassifiers introduction
PDF		Reference Manual
Text		NEWS

Details

biocViews	BiomedicalInformatics, Classification, GeneExpression, Microarray, Software, Survival
Version	1.8.0
In Bioconductor since	BioC 3.5 (R-3.4) (2.5 years)
License	GPL-2
Depends	utils
Imports	methods, stats, Biobase, BiocGenerics
LinkingTo
Suggests	testthat
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	geneClassifiers_1.8.0.tar.gz
Windows Binary	geneClassifiers_1.8.0.zip
Mac OS X 10.11 (El Capitan)	geneClassifiers_1.8.0.tgz
Source Repository	git clone https://git.bioconductor.org/packages/geneClassifiers
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/geneClassifiers
Package Short Url	https://bioconductor.org/packages/geneClassifiers/
Package Downloads Report	Download Stats