flowType

DOI: 10.18129/B9.bioc.flowType    

This package is for version 3.9 of Bioconductor; for the stable, up-to-date release version, see flowType.

Phenotyping Flow Cytometry Assays

Bioconductor version: 3.9

Phenotyping Flow Cytometry Assays using multidimentional expansion of single dimentional partitions.

Author: Nima Aghaeepour, Kieran O'Neill, Adrin Jalali

Maintainer: Nima Aghaeepour <naghaeep at gmail.com>

Installation

To install this package, start R (version "3.6") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("flowType")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("flowType")

 

PDF	R Script	flowType package
PDF		Reference Manual
Text		NEWS

Details

biocViews	FlowCytometry, ImmunoOncology, Software
Version	2.22.0
In Bioconductor since	BioC 2.9 (R-2.14) (8 years)
License	Artistic-2.0
Depends	R (>= 2.10), Rcpp (>= 0.10.4), BH (>= 1.51.0-3)
Imports	Biobase, graphics, grDevices, methods, flowCore, flowMeans, sfsmisc, rrcov, flowClust, flowMerge, stats
LinkingTo	Rcpp, BH
Suggests	xtable
SystemRequirements
Enhances
URL
Depends On Me
Imports Me	RchyOptimyx
Suggests Me
Links To Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	flowType_2.22.0.tar.gz
Windows Binary	flowType_2.22.0.zip
Mac OS X 10.11 (El Capitan)	flowType_2.22.0.tgz
Source Repository	git clone https://git.bioconductor.org/packages/flowType
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/flowType
Package Short Url	https://bioconductor.org/packages/flowType/
Package Downloads Report	Download Stats