affycomp

DOI: 10.18129/B9.bioc.affycomp    

This package is for version 3.9 of Bioconductor; for the stable, up-to-date release version, see affycomp.

Graphics Toolbox for Assessment of Affymetrix Expression Measures

Bioconductor version: 3.9

The package contains functions that can be used to compare expression measures for Affymetrix Oligonucleotide Arrays.

Author: Rafael A. Irizarry <rafa at jhu.edu> and Zhijin Wu <zwu at stat.brown.edu> with contributions from Simon Cawley <simon_cawley at affymetrix.com>

Maintainer: Rafael A. Irizarry <rafa at jhu.edu>

Installation

To install this package, start R (version "3.6") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("affycomp")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("affycomp")

 

PDF	R Script	affycomp primer
PDF		Reference Manual

Details

biocViews	Microarray, OneChannel, Preprocessing, Software
Version	1.60.0
In Bioconductor since	BioC 1.6 (R-2.1) or earlier (> 14.5 years)
License	GPL (>= 2)
Depends	R (>= 2.13.0), methods, Biobase(>= 2.3.3)
Imports
LinkingTo
Suggests	splines, affycompData
SystemRequirements
Enhances
URL
Depends On Me	affycompData
Imports Me
Suggests Me
Links To Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	affycomp_1.60.0.tar.gz
Windows Binary	affycomp_1.60.0.zip
Mac OS X 10.11 (El Capitan)	affycomp_1.60.0.tgz
Source Repository	git clone https://git.bioconductor.org/packages/affycomp
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/affycomp
Package Short Url	https://bioconductor.org/packages/affycomp/
Package Downloads Report	Download Stats