ScISI

DOI: 10.18129/B9.bioc.ScISI    

This package is for version 3.9 of Bioconductor; for the stable, up-to-date release version, see ScISI.

In Silico Interactome

Bioconductor version: 3.9

Package to create In Silico Interactomes

Author: Tony Chiang <tchiang at fhcrc.org>

Maintainer: Tony Chiang <tchiang at fhcrc.org>

Citation (from within R, enter citation("ScISI")):

Installation

To install this package, start R (version "3.6") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("ScISI")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("ScISI")

 

PDF R Script ScISI Vignette
PDF   Reference Manual

Details

biocViews DecisionTree, GraphAndNetwork, NetworkInference, Proteomics, Software
Version 1.56.0
In Bioconductor since BioC 1.8 (R-2.3) (13.5 years)
License LGPL
Depends R (>= 2.10), GO.db, RpsiXML, annotate, apComplex
Imports AnnotationDbi, GO.db, RpsiXML, annotate, methods, org.Sc.sgd.db, utils
LinkingTo
Suggests ppiData, xtable
SystemRequirements
Enhances
URL
Depends On Me PCpheno, ppiStats, SLGI
Imports Me PCpheno, SLGI
Suggests Me RpsiXML
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package ScISI_1.56.0.tar.gz
Windows Binary ScISI_1.56.0.zip
Mac OS X 10.11 (El Capitan) ScISI_1.56.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/ScISI
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/ScISI
Package Short Url https://bioconductor.org/packages/ScISI/
Package Downloads Report Download Stats

Documentation »

Bioconductor

R / CRAN packages and documentation

Support »

Please read the posting guide. Post questions about Bioconductor to one of the following locations: