Prize

DOI: 10.18129/B9.bioc.Prize    

This package is for version 3.9 of Bioconductor; for the stable, up-to-date release version, see Prize.

Prize: an R package for prioritization estimation based on analytic hierarchy process

Bioconductor version: 3.9

The high throughput studies often produce large amounts of numerous genes and proteins of interest. While it is difficult to study and validate all of them. Analytic Hierarchy Process (AHP) offers a novel approach to narrowing down long lists of candidates by prioritizing them based on how well they meet the research goal. AHP is a mathematical technique for organizing and analyzing complex decisions where multiple criteria are involved. The technique structures problems into a hierarchy of elements, and helps to specify numerical weights representing the relative importance of each element. Numerical weight or priority derived from each element allows users to find alternatives that best suit their goal and their understanding of the problem.

Author: Daryanaz Dargahi <daryanazdargahi at gmail.com>

Maintainer: Daryanaz Dargahi <daryanazdargahi at gmail.com>

Installation

To install this package, start R (version "3.6") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("Prize")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("Prize")

 

PDF	R Script	Prize: an R package for prioritization estimation based on analytic hierarchy process
PDF		Reference Manual
Text		NEWS

Details

biocViews	CellBiology, GeneExpression, ImmunoOncology, MultipleComparison, RNASeq, Software
Version	1.14.0
In Bioconductor since	BioC 3.2 (R-3.2) (4 years)
License	Artistic-2.0
Depends
Imports	diagram, stringr, ggplot2, reshape2, grDevices, matrixcalc, stats, gplots, methods, utils, graphics
LinkingTo
Suggests	RUnit, BiocGenerics
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	Prize_1.14.0.tar.gz
Windows Binary	Prize_1.14.0.zip (32- & 64-bit)
Mac OS X 10.11 (El Capitan)	Prize_1.14.0.tgz
Source Repository	git clone https://git.bioconductor.org/packages/Prize
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/Prize
Package Short Url	https://bioconductor.org/packages/Prize/
Package Downloads Report	Download Stats