MAIT

DOI: 10.18129/B9.bioc.MAIT    

This package is for version 3.9 of Bioconductor; for the stable, up-to-date release version, see MAIT.

Statistical Analysis of Metabolomic Data

Bioconductor version: 3.9

The MAIT package contains functions to perform end-to-end statistical analysis of LC/MS Metabolomic Data. Special emphasis is put on peak annotation and in modular function design of the functions.

Author: Francesc Fernandez-Albert, Rafael Llorach, Cristina Andres-LaCueva, Alexandre Perera

Maintainer: Pol Sola-Santos <pol.soladelossantos at gmail.com>

Citation (from within R, enter citation("MAIT")):

Installation

To install this package, start R (version "3.6") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("MAIT")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("MAIT")

 

PDF R Script \maketitleMAIT Vignette
PDF   Reference Manual
Text   NEWS

Details

biocViews ImmunoOncology, MassSpectrometry, Metabolomics, Software
Version 1.18.0
In Bioconductor since BioC 3.0 (R-3.1) (5 years)
License GPL-2
Depends R (>= 2.10), CAMERA, Rcpp, pls
Imports gplots, e1071, class, MASS, plsgenomics, agricolae, xcms, methods, caret
LinkingTo
Suggests faahKO
SystemRequirements
Enhances rgl
URL
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package MAIT_1.18.0.tar.gz
Windows Binary MAIT_1.18.0.zip
Mac OS X 10.11 (El Capitan) MAIT_1.18.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/MAIT
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/MAIT
Package Short Url https://bioconductor.org/packages/MAIT/
Package Downloads Report Download Stats

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