example_sample_annotation {proBatch} | R Documentation |
This is data from BXD aging study with mock instruments to show how instrument-specific functionality works
example_sample_annotation
A data frame with 233 rows and 11 variables:
name of the file, in most functions used for sample_id_col
mass-spectrometry batch: 7-level factor of manually annotated batches
mouse ID, i.e. ID of the biological object
mouse strain ID - biological covariate #1
diet - either HFD
= 'High Fat Diet' or CD
= 'Chow Diet'.
Mix
stands for mixture of several samples
mice sex - 3-level biological covariate. Possible values - ”
mass-spectrometry running date. In combination
with RunTime
used for running order determination
mass-spectrometry running time. In combination
with RunDate
used for running order determination
numeric date and time generated by date_to_sample_order
order of samples generated by sorting DateTime
in date_to_sample_order
peptide digestion batch: 5-level factor of manually annotated batches
...