PPInfer-package |
Inferring functionally related proteins using protein interaction networks |
enrich.net |
Visualize network for the functional enrichment analysis |
GSEA.barplot |
Visualize the gene set enrichment analysis |
net.infer |
Inferring functionally related proteins using networks |
net.infer.ST |
Inferring functionally related proteins with self training |
net.kernel |
Kernel matrix for a graph |
ORA |
Over-representation Analysis |
ORA.barplot |
Visualize the over-representation analysis |
ppi.infer.human |
Inferring functionally related proteins using protein networks for human |
ppi.infer.mouse |
Inferring functionally related proteins using protein networks for mouse |
PPInfer |
Inferring functionally related proteins using protein interaction networks |
self.train.kernel |
Self training for a kernel matrix |