Omics Longitudinal Differential Analysis


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Documentation for package ‘OmicsLonDA’ version 1.0.0

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adjustBaseline Adjust for baseline differences using Centered-Log Ratio
curveFitting Fit longitudinal data
findSigInterval Find Significant Interval based on testStat
omicslonda Omics Longitudinal Differential Analysis for one feature
omicslonda_data_example Simulated dataset
permutationMC Permute group labels
testStat Calculate Test-Statistic of each feature's time interval
testStatPermutation Calculate testStat of each feature's time interval for all permutations
visualizeArea Visualize significant time interval
visualizeFeature Visualize Longitudinal Feature
visualizeFeatureSpline Visualize the feature trajectory with the fitted Splines
visualizeTestStatHistogram Visualize test statistics empirical distribution