class:LRBaseDb |
LRBaseDb objects |
columns |
A function to return the columns of LRBase that user can retrieve |
columns-method |
A function to return the columns of LRBase that user can retrieve |
dbconn |
A function to return the connection to sqlite3 file |
dbconn-method |
A function to return the connection to sqlite3 file |
dbfile |
A function to return the directory that the sqlite3 file stored |
dbfile-method |
A function to return the directory that the sqlite3 file stored |
dbInfo |
A function to return the database information |
dbInfo-method |
A function to return the database information |
dbschema |
A function to return the schema of sqlite-database |
dbschema-method |
A function to return the schema of sqlite-database |
FANTOM5 |
Data to construct user's original LRBaseDb package |
generic,columns |
A function to return the columns of LRBase that user can retrieve |
generic,dbconn |
A function to return the connection to sqlite3 file |
generic,dbfile |
A function to return the directory that the sqlite3 file stored |
generic,dbInfo |
A function to return the database information |
generic,dbschema |
A function to return the schema of sqlite-database |
generic,keys |
A function defined by AnnotationDbi to return the keys |
generic,keytypes |
A function to return the columns that user can specified in select function |
generic,lrListDatabases |
A function to return the list of databases used in the package |
generic,lrNomenclature |
A function to return the scientific name |
generic,lrPackageName |
A function to return the package name |
generic,lrVersion |
A function to return the LRBase version of package |
generic,select |
select function defined by AnnotationDbi-class |
generic,species |
A function to return the name of organism |
keys |
A function defined by AnnotationDbi to return the keys |
keys-method |
A function defined by AnnotationDbi to return the keys |
keytypes |
A function to return the columns that user can specified in select function |
keytypes-method |
A function to return the columns that user can specified in select function |
LRBaseDb |
LRBaseDb objects |
LRBaseDb-class |
LRBaseDb objects |
lrListDatabases |
A function to return the list of databases used in the package |
lrListDatabases-method |
A function to return the list of databases used in the package |
lrNomenclature |
A function to return the scientific name |
lrNomenclature-method |
A function to return the scientific name |
lrPackageName |
A function to return the package name |
lrPackageName-method |
A function to return the package name |
lrVersion |
A function to return the LRBase version of package |
lrVersion-method |
A function to return the LRBase version of package |
makeLRBasePackage |
Making LRBaseDb packages from corresponding table as single data frame. |
metaFANTOM5 |
Metadata to construct user's original LRBaseDb package |
select |
select function defined by AnnotationDbi-class |
select-method |
select function defined by AnnotationDbi-class |
species |
A function to return the name of organism |
species-method |
A function to return the name of organism |