addInfo | add info to quartet annotation |
analyseCGH | GLAD analysis |
fromQuartetToSnp | Compute the copy number of each SNP from its quartets intensities |
fromSnpToQuartet | Function to get from snp to quartet |
getConfDat | Elimination of badly predicted probes |
getCorrection | Correction |
getEffet | Effet |
getModel | Regression Model |
getQuartet | Function to retrieve the information of each quartet |
getResidu | Correction |
getSnpInfo | Function to retrieve the chromosome and the position of each SNP on a given Affymetrix SNP array |
ITALICS | Affymetrix SNP chip normalization |
Italics | Affymetrix SNP chip normalization |
italics | Affymetrix SNP chip normalization |
readQuartetCopyNb | Read PM probes of selected quartets and compute the quartet intensity |
trainITALICS | ITALICS training |
trainItalics | ITALICS training |
trainitalics | ITALICS training |