DOI: 10.18129/B9.bioc.leeBamViews    

This package is for version 3.8 of Bioconductor; for the stable, up-to-date release version, see leeBamViews.

leeBamViews -- multiple yeast RNAseq samples excerpted from Lee 2009

Bioconductor version: 3.8

data from PMID 19096707; prototype for managing multiple NGS samples

Author: VJ Carey <stvjc at channing.harvard.edu>

Maintainer: VJ Carey <stvjc at channing.harvard.edu>

Citation (from within R, enter citation("leeBamViews")):


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PDF R Script managing multiple NGS samples with bamViews
PDF   Reference Manual


biocViews ExperimentData, RNASeqData, SNPData, Saccharomyces_cerevisiae_Data, SequencingData
Version 1.18.0
License Artistic 2.0
Depends R (>= 2.15.0), Biobase, Rsamtools(>= 0.1.50), BSgenome
Imports GenomicRanges, GenomicAlignments, methods
Suggests GenomeGraphs, biomaRt, org.Sc.sgd.db, edgeR
Enhances multicore
Depends On Me
Imports Me
Suggests Me EDASeq
Links To Me
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Source Package leeBamViews_1.18.0.tar.gz
Windows Binary
Mac OS X 10.11 (El Capitan)
Source Repository git clone https://git.bioconductor.org/packages/leeBamViews
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/leeBamViews
Package Short Url http://bioconductor.org/packages/leeBamViews/
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