ceu1kg

DOI: 10.18129/B9.bioc.ceu1kg    

This package is for version 3.8 of Bioconductor; for the stable, up-to-date release version, see ceu1kg.

CEU (N=60) genotypes from 1000 genomes pilot phase I

Bioconductor version: 3.8

CEU genotypes from 1000 genomes "low coverage" pilot phase I (approx 8 million SNP calls released July 2010); includes Wellcome trust GENEVAR expression for 43 indiv

Author: VJ Carey <stvjc at channing.harvard.edu>

Maintainer: VJ Carey <stvjc at channing.harvard.edu>

Installation

To install this package, start R (version "3.5") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")
BiocManager::install("ceu1kg")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("ceu1kg")

 

PDF	R Script	ceu1kg overview
PDF		Reference Manual

Details

biocViews	ExperimentData, HapMap, Project1000genomes, SNPData
Version	0.20.0
License	Artistic-2.0
Depends	R (>= 2.12.0), GGBase(>= 3.9.0), GGtools, Biobase
Imports
LinkingTo
Suggests	SNPlocs.Hsapiens.dbSNP.20101109
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	ceu1kg_0.20.0.tar.gz
Windows Binary
Mac OS X 10.11 (El Capitan)
Source Repository	git clone https://git.bioconductor.org/packages/ceu1kg
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/ceu1kg
Package Short Url	http://bioconductor.org/packages/ceu1kg/
Package Downloads Report	Download Stats