DOI: 10.18129/B9.bioc.affydata    

This package is for version 3.8 of Bioconductor; for the stable, up-to-date release version, see affydata.

Affymetrix Data for Demonstration Purpose

Bioconductor version: 3.8

Example datasets of a slightly large size. They represent 'real world examples', unlike the artificial examples included in the package affy.

Author: Laurent Gautier <laurent at>

Maintainer: Harris Jaffee <hj at>

Citation (from within R, enter citation("affydata")):


To install this package, start R (version "3.5") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))

For older versions of R, please refer to the appropriate Bioconductor release.


To view documentation for the version of this package installed in your system, start R and enter:



PDF R Script affydata primer
PDF   Reference Manual


biocViews ExperimentData, MicroarrayData, Tissue, TissueMicroarrayData
Version 1.30.0
In Bioconductor since BioC 1.6 (R-2.1) or earlier (> 14 years)
License GPL (>= 2)
Depends R (>= 2.4.0), affy(>= 1.23.4)
Imports methods
Suggests hgu95av2cdf, hgu133acdf
Depends On Me affyContam
Imports Me
Suggests Me affy, affycoretools, affyPara, affypdnn, affyPLM, affyQCReport, arrayMvout, ArrayTools, bgx, Biostrings, farms, gcrma, Harman, LMGene, mimager, puma, pvac, RefPlus, RPA, sscore, TurboNorm, vsn, yaqcaffy
Links To Me
Build Report  

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Follow Installation instructions to use this package in your R session.

Source Package affydata_1.30.0.tar.gz
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