BSgenome.Hsapiens.1000genomes.hs37d5

DOI: 10.18129/B9.bioc.BSgenome.Hsapiens.1000genomes.hs37d5    

This package is for version 3.8 of Bioconductor; for the stable, up-to-date release version, see BSgenome.Hsapiens.1000genomes.hs37d5.

1000genomes Reference Genome Sequence (hs37d5)

Bioconductor version: 3.8

1000genomes Phase2 Reference Genome Sequence (hs37d5), based on NCBI GRCh37.

Author: Julian Gehring

Maintainer: Julian Gehring <jg-bioc at gmx.com>

Citation (from within R, enter citation("BSgenome.Hsapiens.1000genomes.hs37d5")):

Installation

To install this package, start R (version "3.5") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")
BiocManager::install("BSgenome.Hsapiens.1000genomes.hs37d5")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

PDF   Reference Manual

Details

biocViews AnnotationData, BSgenome, Genetics, Homo_sapiens
Version 0.99.1
License Artistic-2.0
Depends BSgenome(>= 1.34.0)
Imports
LinkingTo
Suggests
SystemRequirements
Enhances
URL
Depends On Me
Imports Me SparseSignatures
Suggests Me MutationalPatterns, SomaticSignatures, VariantFiltering
Links To Me

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package BSgenome.Hsapiens.1000genomes.hs37d5_0.99.1.tar.gz
Windows Binary
Mac OS X 10.11 (El Capitan)
Package Short Url http://bioconductor.org/packages/BSgenome.Hsapiens.1000genomes.hs37d5/
Package Downloads Report Download Stats

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