DOI: 10.18129/B9.bioc.waveTiling    

This package is for version 3.8 of Bioconductor; for the stable, up-to-date release version, see waveTiling.

Wavelet-Based Models for Tiling Array Transcriptome Analysis

Bioconductor version: 3.8

This package is designed to conduct transcriptome analysis for tiling arrays based on fast wavelet-based functional models.

Author: Kristof De Beuf <kristof.debeuf at UGent.be>, Peter Pipelers <peter.pipelers at ugent.be> and Lieven Clement <lieven.clement at gmail.com>

Maintainer: Kristof De Beuf <kristof.debeuf at UGent.be>

Citation (from within R, enter citation("waveTiling")):


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if (!requireNamespace("BiocManager", quietly = TRUE))

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PDF R Script The waveTiling package
PDF   Reference Manual
Text   NEWS


biocViews DifferentialExpression, GeneExpression, Microarray, Software, TimeCourse
Version 1.24.0
In Bioconductor since BioC 2.11 (R-2.15) (6.5 years)
License GPL (>=2)
Depends oligo, oligoClasses, Biobase, Biostrings, GenomeGraphs
Imports methods, affy, preprocessCore, GenomicRanges, waveslim, IRanges
Suggests BSgenome, BSgenome.Athaliana.TAIR.TAIR9, waveTilingData, pd.atdschip.tiling, TxDb.Athaliana.BioMart.plantsmart22
URL https://r-forge.r-project.org/projects/wavetiling/
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Source Package waveTiling_1.24.0.tar.gz
Windows Binary waveTiling_1.24.0.zip
Mac OS X 10.11 (El Capitan) waveTiling_1.24.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/waveTiling
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/waveTiling
Package Short Url http://bioconductor.org/packages/waveTiling/
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