prot2D

DOI: 10.18129/B9.bioc.prot2D    

This package is deprecated. It will probably be removed from Bioconductor. Please refer to the package end-of-life guidelines for more information.

This package is for version 3.8 of Bioconductor. This package has been removed from Bioconductor. For the last stable, up-to-date release version, see prot2D.

Statistical Tools for volume data from 2D Gel Electrophoresis

Bioconductor version: 3.8

The purpose of this package is to analyze (i.e. Normalize and select significant spots) data issued from 2D GEl experiments

Author: Sebastien Artigaud

Maintainer: Sebastien Artigaud <sebastien.artigaud at gmx.com>

Installation

To install this package, start R (version "3.5") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")
BiocManager::install("prot2D")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("prot2D")

 

PDF	R Script	prot2D
PDF		Reference Manual

Details

biocViews	DifferentialExpression, MultipleComparison, Proteomics, Software
Version	1.20.0
In Bioconductor since	BioC 2.13 (R-3.0) (5.5 years)
License	GPL (>= 2)
Depends	R (>= 2.15), fdrtool, st, samr, Biobase, limma, Mulcom, impute, MASS, qvalue
Imports
LinkingTo
Suggests	made4, affy
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	prot2D_1.20.0.tar.gz
Windows Binary	prot2D_1.20.0.zip
Mac OS X 10.11 (El Capitan)	prot2D_1.20.0.tgz
Source Repository	git clone https://git.bioconductor.org/packages/prot2D
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/prot2D
Package Short Url	http://bioconductor.org/packages/prot2D/
Package Downloads Report	Download Stats