DOI: 10.18129/B9.bioc.multiOmicsViz    

This package is for version 3.8 of Bioconductor; for the stable, up-to-date release version, see multiOmicsViz.

Plot the effect of one omics data on other omics data along the chromosome

Bioconductor version: 3.8

Calculate the spearman correlation between the source omics data and other target omics data, identify the significant correlations and plot the significant correlations on the heat map in which the x-axis and y-axis are ordered by the chromosomal location.

Author: Jing Wang <jingwang.uestc at>

Maintainer: Jing Wang <jingwang.uestc at>

Citation (from within R, enter citation("multiOmicsViz")):


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if (!requireNamespace("BiocManager", quietly = TRUE))

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biocViews Software, SystemsBiology, Visualization
Version 1.6.0
In Bioconductor since BioC 3.5 (R-3.4) (2 years)
License LGPL
Depends R (>= 3.3.2)
Imports methods, parallel, doParallel, foreach, grDevices, graphics, utils, SummarizedExperiment, stats
Suggests BiocGenerics
Depends On Me
Imports Me
Suggests Me
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