flowTrans

DOI: 10.18129/B9.bioc.flowTrans    

This package is for version 3.8 of Bioconductor; for the stable, up-to-date release version, see flowTrans.

Parameter Optimization for Flow Cytometry Data Transformation

Bioconductor version: 3.8

Profile maximum likelihood estimation of parameters for flow cytometry data transformations.

Author: Greg Finak <gfinak at fredhutch.org>, Juan Manuel-Perez <jperez at ircm.qc.ca>, Raphael Gottardo <rgottard at fredhutch.org>

Maintainer: Greg Finak <gfinak at fredhutch.org>

Installation

To install this package, start R (version "3.5") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")
BiocManager::install("flowTrans")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("flowTrans")

 

PDF	R Script	flowTrans package
PDF		Reference Manual

Details

biocViews	FlowCytometry, ImmunoOncology, Software
Version	1.34.1
In Bioconductor since	BioC 2.6 (R-2.11) (9 years)
License	Artistic-2.0
Depends	R (>= 2.11.0), flowCore, flowViz, flowClust
Imports	flowCore, methods, flowViz, stats, flowClust
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Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	flowTrans_1.34.1.tar.gz
Windows Binary	flowTrans_1.34.1.zip
Mac OS X 10.11 (El Capitan)	flowTrans_1.34.1.tgz
Source Repository	git clone https://git.bioconductor.org/packages/flowTrans
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/flowTrans
Package Short Url	http://bioconductor.org/packages/flowTrans/
Package Downloads Report	Download Stats