flowQB

DOI: 10.18129/B9.bioc.flowQB    

This package is for version 3.8 of Bioconductor; for the stable, up-to-date release version, see flowQB.

Automated Quadratic Characterization of Flow Cytometer Instrument Sensitivity: Q, B and CV instrinsic calculations

Bioconductor version: 3.8

flowQB is a fully automated R Bioconductor package to calculate automatically the detector efficiency (Q), optical background (B) and intrinsic CV of the beads.

Author: Josef Spidlen, Faysal El Khettabi, Wayne Moore, David Parks, Ryan Brinkman

Maintainer: Josef Spidlen <jspidlen at gmail.com>

Citation (from within R, enter citation("flowQB")):

Installation

To install this package, start R (version "3.5") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")
BiocManager::install("flowQB")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("flowQB")

 

PDF R Script flowQB package
PDF   Reference Manual
Text   NEWS

Details

biocViews FlowCytometry, ImmunoOncology, MultiChannel, OneChannel, PeakDetection, QualityControl, Regression, Software
Version 2.10.1
In Bioconductor since BioC 2.11 (R-2.15) (6.5 years)
License Artistic-2.0
Depends
Imports methods, flowCore(>= 1.32.0), stats, extremevalues
LinkingTo
Suggests flowQBData, FlowRepositoryR, xlsx, RUnit, BiocGenerics
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me flowQBData
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package flowQB_2.10.1.tar.gz
Windows Binary flowQB_2.10.1.zip
Mac OS X 10.11 (El Capitan) flowQB_2.10.1.tgz
Source Repository git clone https://git.bioconductor.org/packages/flowQB
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/flowQB
Package Short Url http://bioconductor.org/packages/flowQB/
Package Downloads Report Download Stats

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