SwathXtend

DOI: 10.18129/B9.bioc.SwathXtend    

This package is for version 3.8 of Bioconductor; for the stable, up-to-date release version, see SwathXtend.

SWATH extended library generation and statistical data analysis

Bioconductor version: 3.8

Contains utility functions for integrating spectral libraries for SWATH and statistical data analysis for SWATH generated data.

Author: J WU and D Pascovici

Maintainer: Jemma Wu <jwu at proteome.org.au>

Citation (from within R, enter citation("SwathXtend")):

Installation

To install this package, start R (version "3.5") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")
BiocManager::install("SwathXtend")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("SwathXtend")

 

PDF R Script SwathXtend
PDF   Reference Manual

Details

biocViews Software
Version 2.4.0
In Bioconductor since BioC 3.3 (R-3.3) (3 years)
License GPL-2
Depends e1071, openxlsx, VennDiagram, lattice
Imports
LinkingTo
Suggests
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package SwathXtend_2.4.0.tar.gz
Windows Binary SwathXtend_2.4.0.zip
Mac OS X 10.11 (El Capitan) SwathXtend_2.4.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/SwathXtend
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/SwathXtend
Package Short Url http://bioconductor.org/packages/SwathXtend/
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