Rtreemix

DOI: 10.18129/B9.bioc.Rtreemix    

This package is for version 3.8 of Bioconductor; for the stable, up-to-date release version, see Rtreemix.

Rtreemix: Mutagenetic trees mixture models.

Bioconductor version: 3.8

Rtreemix is a package that offers an environment for estimating the mutagenetic trees mixture models from cross-sectional data and using them for various predictions. It includes functions for fitting the trees mixture models, likelihood computations, model comparisons, waiting time estimations, stability analysis, etc.

Author: Jasmina Bogojeska

Maintainer: Jasmina Bogojeska <jasmina.bogojeska at gmail.com>

Installation

To install this package, start R (version "3.5") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")
BiocManager::install("Rtreemix")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("Rtreemix")

 

PDF	R Script	Rtreemix
PDF		Reference Manual

Details

biocViews	Software, StatisticalMethod
Version	1.44.0
In Bioconductor since	BioC 2.2 (R-2.7) (11 years)
License	LGPL
Depends	R (>= 2.5.0)
Imports	methods, graph, Biobase, Hmisc
LinkingTo
Suggests	Rgraphviz
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
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Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	Rtreemix_1.44.0.tar.gz
Windows Binary	Rtreemix_1.44.0.zip (32- & 64-bit)
Mac OS X 10.11 (El Capitan)	Rtreemix_1.44.0.tgz
Source Repository	git clone https://git.bioconductor.org/packages/Rtreemix
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/Rtreemix
Package Short Url	http://bioconductor.org/packages/Rtreemix/
Package Downloads Report	Download Stats