DOI: 10.18129/B9.bioc.RnaSeqSampleSize    

This package is for version 3.8 of Bioconductor; for the stable, up-to-date release version, see RnaSeqSampleSize.


Bioconductor version: 3.8

RnaSeqSampleSize package provides a sample size calculation method based on negative binomial model and the exact test for assessing differential expression analysis of RNA-seq data

Author: Shilin Zhao, Chung-I Li, Yan Guo, Quanhu Sheng, Yu Shyr

Maintainer: Shilin Zhao <zhaoshilin at gmail.com>

Citation (from within R, enter citation("RnaSeqSampleSize")):


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PDF R Script RnaSeqSampleSize: Sample size estimation by real data
PDF   Reference Manual
Text   NEWS


biocViews DifferentialExpression, ExperimentalDesign, GeneExpression, ImmunoOncology, RNASeq, Sequencing, Software
Version 1.14.1
In Bioconductor since BioC 3.1 (R-3.2) (4 years)
License GPL (>= 2)
Depends R (>= 2.10), RnaSeqSampleSizeData
Imports biomaRt, edgeR, heatmap3, matlab, KEGGREST, Rcpp (>= 0.11.2)
LinkingTo Rcpp
Suggests BiocStyle, knitr
Depends On Me
Imports Me
Suggests Me
Links To Me
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Source Package RnaSeqSampleSize_1.14.1.tar.gz
Windows Binary RnaSeqSampleSize_1.14.1.zip
Mac OS X 10.11 (El Capitan) RnaSeqSampleSize_1.14.1.tgz
Source Repository git clone https://git.bioconductor.org/packages/RnaSeqSampleSize
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/RnaSeqSampleSize
Package Short Url http://bioconductor.org/packages/RnaSeqSampleSize/
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