LBE

DOI: 10.18129/B9.bioc.LBE    

This package is for version 3.8 of Bioconductor; for the stable, up-to-date release version, see LBE.

Estimation of the false discovery rate.

Bioconductor version: 3.8

LBE is an efficient procedure for estimating the proportion of true null hypotheses, the false discovery rate (and so the q-values) in the framework of estimating procedures based on the marginal distribution of the p-values without assumption for the alternative hypothesis.

Author: Cyril Dalmasso

Maintainer: Cyril Dalmasso <dalmasso at vjf.inserm.fr>

Installation

To install this package, start R (version "3.5") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")
BiocManager::install("LBE")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("LBE")

 

PDF	R Script	LBE Vignette
PDF		Reference Manual

Details

biocViews	MultipleComparison, Software
Version	1.50.0
In Bioconductor since	BioC 2.0 (R-2.5) (12 years)
License	GPL-2
Depends	stats
Imports	graphics, grDevices, methods, stats, utils
LinkingTo
Suggests	qvalue
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	LBE_1.50.0.tar.gz
Windows Binary	LBE_1.50.0.zip
Mac OS X 10.11 (El Capitan)	LBE_1.50.0.tgz
Source Repository	git clone https://git.bioconductor.org/packages/LBE
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/LBE
Package Short Url	http://bioconductor.org/packages/LBE/
Package Downloads Report	Download Stats