This package is for version 3.8 of Bioconductor; for the stable, up-to-date release version, see GraphAlignment.
Bioconductor version: 3.8
Graph alignment is an extension package for the R programming environment which provides functions for finding an alignment between two networks based on link and node similarity scores. (J. Berg and M. Laessig, "Cross-species analysis of biological networks by Bayesian alignment", PNAS 103 (29), 10967-10972 (2006))
Author: Joern P. Meier <mail at ionflux.org>, Michal Kolar, Ville Mustonen, Michael Laessig, and Johannes Berg.
Maintainer: Joern P. Meier <mail at ionflux.org>
Citation (from within R,
enter citation("GraphAlignment")
):
To install this package, start R (version "3.5") and enter:
if (!requireNamespace("BiocManager", quietly = TRUE)) install.packages("BiocManager") BiocManager::install("GraphAlignment")
For older versions of R, please refer to the appropriate Bioconductor release.
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("GraphAlignment")
R Script | GraphAlignment | |
Reference Manual | ||
Text | LICENSE |
biocViews | GraphAndNetwork, Network, Software |
Version | 1.46.0 |
In Bioconductor since | BioC 2.2 (R-2.7) (11 years) |
License | file LICENSE |
Depends | |
Imports | |
LinkingTo | |
Suggests | |
SystemRequirements | |
Enhances | |
URL | http://www.thp.uni-koeln.de/~berg/GraphAlignment/ |
Depends On Me | |
Imports Me | |
Suggests Me | |
Links To Me | |
Build Report |
Follow Installation instructions to use this package in your R session.
Source Package | GraphAlignment_1.46.0.tar.gz |
Windows Binary | GraphAlignment_1.46.0.zip (32- & 64-bit) |
Mac OS X 10.11 (El Capitan) | GraphAlignment_1.46.0.tgz |
Source Repository | git clone https://git.bioconductor.org/packages/GraphAlignment |
Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/GraphAlignment |
Package Short Url | http://bioconductor.org/packages/GraphAlignment/ |
Package Downloads Report | Download Stats |
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