DOI: 10.18129/B9.bioc.GISPA    

This package is for version 3.8 of Bioconductor; for the stable, up-to-date release version, see GISPA.

GISPA: Method for Gene Integrated Set Profile Analysis

Bioconductor version: 3.8

GISPA is a method intended for the researchers who are interested in defining gene sets with similar, a priori specified molecular profile. GISPA method has been previously published in Nucleic Acid Research (Kowalski et al., 2016; PMID: 26826710).

Author: Bhakti Dwivedi and Jeanne Kowalski

Maintainer: Bhakti Dwivedi <bhakti.dwivedi at>

Citation (from within R, enter citation("GISPA")):


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biocViews GeneSetEnrichment, GenomeWideAssociation, Software, StatisticalMethod
Version 1.6.0
In Bioconductor since BioC 3.5 (R-3.4) (2 years)
License GPL-2
Depends R (>= 3.3.2)
Imports Biobase, changepoint, data.table, genefilter, graphics, GSEABase, HH, lattice, latticeExtra, plyr, scatterplot3d, stats
Suggests knitr
Depends On Me
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