FamAgg

DOI: 10.18129/B9.bioc.FamAgg    

This package is for version 3.8 of Bioconductor; for the stable, up-to-date release version, see FamAgg.

Pedigree Analysis and Familial Aggregation

Bioconductor version: 3.8

Framework providing basic pedigree analysis and plotting utilities as well as a variety of methods to evaluate familial aggregation of traits in large pedigrees.

Author: J. Rainer, D. Taliun, C.X. Weichenberger

Maintainer: Johannes Rainer <johannes.rainer at eurac.edu>

Installation

To install this package, start R (version "3.5") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")
BiocManager::install("FamAgg")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("FamAgg")

 

HTML	R Script	Pedigree Analysis and Familial Aggregation
PDF		Reference Manual
Text		NEWS
Text		LICENSE

Details

biocViews	Genetics, Software
Version	1.10.4
In Bioconductor since	BioC 3.3 (R-3.3) (3 years)
License	MIT + file LICENSE
Depends	methods, kinship2, igraph
Imports	gap (>= 1.1-17), Matrix, BiocGenerics, utils, survey
LinkingTo
Suggests	BiocStyle, knitr, RUnit, rmarkdown
SystemRequirements
Enhances
URL	https://github.com/EuracBiomedicalResearch/FamAgg
BugReports	https://github.com/EuracBiomedicalResearch/FamAgg/issues
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	FamAgg_1.10.4.tar.gz
Windows Binary	FamAgg_1.10.4.zip
Mac OS X 10.11 (El Capitan)	FamAgg_1.10.4.tgz
Source Repository	git clone https://git.bioconductor.org/packages/FamAgg
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/FamAgg
Package Short Url	http://bioconductor.org/packages/FamAgg/
Package Downloads Report	Download Stats