Brick_path_to_file {HiCBricks}R Documentation

Check if a Brick is being tracked.

Description

Brick_path_to_file will query the tracking cache and return the complete path to the file that is being tracked.

Usage

Brick_path_to_file(Brick = NULL)

Arguments

Brick

required Path to the Brick file to locate.

Value

Returns the corresponding path to the file that is being tracked.

Examples


Bintable.path <- system.file("extdata",
"Bintable_40kb.txt", package = "HiCBricks")
Chromosomes <- "chr19"
Path_to_cached_file <- CreateBrick(ChromNames = Chromosomes,
BinTable = Bintable.path, bin.delim = " ",
Output.Filename = "test.hdf", exec = "cat",
remove.existing = TRUE)

Brick.file <- "test.hdf"
Brick_path_to_file(Brick = Brick.file)

[Package HiCBricks version 1.0.0 Index]