hpaExport {HPAanalyze} | R Documentation |
Export the list object generated by hpaSubset()
into xlsx format. Due
to the size of some HPA datasets, as well as the limitation of the output
format, exporting the full datasets generated by hpaDownload()
is not
recommended.
hpaExport(data, fileName, fileType = "xlsx")
data |
Input the list object generated by |
fileName |
A string indicate the desired output file name |
fileType |
For compability of future development. Currently the only
option is |
This function will create an xlsx file which one individual spreadsheet for each datasets in the input list object.
Other downloadable datasets functions: hpaDownload
,
hpaSubset
downloadedData <- hpaDownload(downloadList='all', version='example') geneList <- c('TP53', 'EGFR') tissueList <- c('breast', 'cerebellum', 'skin 1') cancerList <- c('breast cancer', 'glioma', 'melanoma') subsetData <- hpaSubset(data=downloadedData, targetGene=geneList, targetTissue=tissueList, targetCancer=cancerList) hpaExport(data=subsetData, fileName='TP53_EGFR_in_tissue_cancer.xlsx', fileType='xlsx')