mc3toGR {BiocOncoTK} | R Documentation |
create a GRanges from the MC3 mutation data
mc3toGR(bq, basicfilt = function(data) dplyr::filter(data, Consequence == "non_coding_transcript_exon_variant"), maxnrec = 1e+05)
bq |
bigrquery BigQueryConnection instance |
basicfilt |
a dplyr::filter instance or NULL to convert entire MAF |
maxnrec |
numeric(1) used with dplyr::as.data.frame en route to GRanges |
a GRanges instance
mc3toGR