Regional Expression Biases


[Up] [Top]

Documentation for package ‘reb’ version 1.60.0

Help Pages

absMax Absolute Maxima
buildChromCytoband Construct a chromLocation object from a cytoband environment
buildChromMap A function to generate an instantiation of a chromLocation class
cgma Compute Summary Statistics of Genome Regions
cset2band cset2band
fromRevIsh Convert from revish strings to a matrix
Hs.arms Hs.arms
isAbnormal Is a band 'abnormal'?
mcr.eset Example exprSet and chromLocation objects
movbin movbin
movt movt
naMean Wrapper function for the arithmetic mean
reb reb
regmap image function wrapper
revish Creation of CGH (reverse in situ hybridization) style character strings
rmAmbigMappings Remove genes that map to multiple chromosomes from a chromLocation object
smoothByRegion reb
summarizeByRegion Compute Summary Statistics of Genome Regions
tBinomTest binomial t-test
writeGFF3 Output of a GFF compliant table describing the enhanced and diminished chromosomal bands.