netbenchmark-package | Benchmarking of several inference networks methods |
aracne.wrap | aracne wrapper function |
aupr | Compute metrics |
auroc | Compute metrics |
c3net.wrap | c3net wrapper function |
clr.wrap | CLR wrapper function |
comp.metr | Compute metrics |
datasource.subsample | Subsampling datasource procedure |
evaluate | Inference Evaluation |
experiments.bench | Noise sensitivity benchmark |
fscore | Compute metrics |
GeneNet.wrap | GeneNet wrapper function |
Genie3.wrap | Genie3 wrapper function |
mean.pr | Compute metrics |
mrnet.wrap | mrnet wrapper function |
mrnetb.wrap | mrnetb wrapper function |
mutrank.wrap | Mutual Rank wrapper function |
netbenchmark | Benchmarking of several network inference algorithms from data |
netbenchmark.data | Benchmarking of several network inference algorithms for your own data |
netbenchmark_rate | Inference Validation |
netbenchmark_zsc | Z-score c++ function |
noise.bench | Noise sensitivity test |
ntb_globals | Available wrappers in the package of the fast methods |
pcit.wrap | pcit wrapper function |
pr.compute | Compute metrics |
pr.plot | Compute metrics |
rate | Inference Validation |
RegisterWrapper | Wrapper (un)registration routine |
roc.compute | Compute metrics |
roc.plot | Compute metrics |
UnregisterWrapper | Wrapper (un)registration routine |
zsc | Z-score c++ function |
zscore.wrap | Zscore wrapper function |