TMixClust-package | The main usages of TMixClust |
analyse_stability | Stability analysis, clustering evaluation and optimal solution selection |
best_clust_toy_obj | TMixClust object containing the optimal clustering solution for the toy data with 3 clusters. |
best_clust_yeast_obj | TMixClust object containing the optimal clustering solution for the yeast data. |
generate_TMixClust_report | Generates a series of files containing a summary of the TMixClust analysis results |
get_time_series_df | Extracts a time series data frame from a text file |
get_time_series_df_bio | Extracts a time series data frame from a Bioconductor Biobase ExpressionSet object. |
plot_silhouette | Generates a silhouette plot for a given clustering configuration. |
plot_time_series_df | Plots all the time series stored in a data frame object |
TMixClust | Clusters the time series data in a given number of groups |
toy_data_df | Simulated time-series gene expression data |