SIMD-package | A method to infer the methylation expression level for each CpG sites. |
EMalgorithm | EM algorithm to infer CpG sites. |
emalgth | Calculate the probability on condition that the sums equal to 1. |
emalgth1 | Calculate the probability on condition that the sums more than 1. |
EMtest | Inferring the methylation expression level of single sites. |
probBinom | Compute P-values for Medip-seq and MRE-seq data. |