ChIPComp-package | Detect differential binding sites for ChIP sequencing data |
ChIPComp | Perform hypothesis testing to detect differential binding sites |
makeConf | make configurations for experimental design written in csv sheet |
makeCountSet | make differential binding sites data frame |
plot.ChIPComp | plot correlation between log ChIP read counts and smoothing control counts in common binding sites. |
print.ChIPComp | Print top ranked differential binding sites |
seqData | A 'ChIPComp' object. |