Nearest Neighbor Detection for Bioconductor Packages


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Documentation for package ‘BiocNeighbors’ version 1.0.0

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AnnoyIndex The AnnoyIndex class
AnnoyIndex-class The AnnoyIndex class
AnnoyIndex_path The AnnoyIndex class
AnnoyParam The AnnoyParam class
AnnoyParam-class The AnnoyParam class
AnnoyParam_directory The AnnoyParam class
AnnoyParam_ntrees The AnnoyParam class
BiocNeighborIndex-class The BiocNeighborIndex class
BiocNeighborParam-class The BiocNeighborParam class
buildAnnoy Build an Annoy index
buildKmknn Pre-cluster points with k-means
buildNNIndex Build a nearest-neighbor index
buildNNIndex-method Build a nearest-neighbor index
dim-method The AnnoyIndex class
dim-method The KmknnIndex class
dimnames-method The AnnoyIndex class
dimnames-method The BiocNeighborIndex class
dimnames-method The KmknnIndex class
findAnnoy Find approximate nearest neighbors
findKmknn Find nearest neighbors
findKNN Find k-nearest neighbors
findKNN-method Find k-nearest neighbors
findNeighbors Find all neighbors
KmknnIndex The KmknnIndex class
KmknnIndex-class The KmknnIndex class
KmknnIndex_clustered_data The KmknnIndex class
KmknnIndex_clustered_order The KmknnIndex class
KmknnIndex_cluster_centers The KmknnIndex class
KmknnIndex_cluster_info The KmknnIndex class
KmknnParam The KmknnParam class
KmknnParam-class The KmknnParam class
KmknnParam_kmeans_args The KmknnParam class
queryAnnoy Query nearest neighbors
queryKmknn Query nearest neighbors
queryKNN Query k-nearest neighbors
queryKNN-method Query k-nearest neighbors
queryNeighbors Query neighbors
show-method The AnnoyIndex class
show-method The AnnoyParam class
show-method The BiocNeighborIndex class
show-method The BiocNeighborParam class
show-method The KmknnIndex class
show-method The KmknnParam class