DOI: 10.18129/B9.bioc.rBiopaxParser    

This package is for version 3.7 of Bioconductor; for the stable, up-to-date release version, see rBiopaxParser.

Parses BioPax files and represents them in R

Bioconductor version: 3.7

Parses BioPAX files and represents them in R, at the moment BioPAX level 2 and level 3 are supported.

Author: Frank Kramer

Maintainer: Frank Kramer <dev at frankkramer.de>

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PDF R Script rBiopaxParser Vignette
PDF   Reference Manual
Text   NEWS


biocViews DataRepresentation, Software
Version 2.20.0
In Bioconductor since BioC 2.12 (R-3.0) (5.5 years)
License GPL (>= 2)
Depends R (>= 3.0.0), data.table
Imports XML
Suggests Rgraphviz, RCurl, graph, RUnit, BiocGenerics, nem, RBGL, igraph
URL https://github.com/frankkramer-lab/rBiopaxParser
Depends On Me
Imports Me AnnotationHubData, pwOmics
Suggests Me AnnotationHub, NetPathMiner
Links To Me
Build Report  

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Source Package rBiopaxParser_2.20.0.tar.gz
Windows Binary rBiopaxParser_2.20.0.zip
Mac OS X 10.11 (El Capitan) rBiopaxParser_2.20.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/rBiopaxParser
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/rBiopaxParser
Package Short Url http://bioconductor.org/packages/rBiopaxParser/
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