DOI: 10.18129/B9.bioc.omicsPrint    

This package is for version 3.7 of Bioconductor; for the stable, up-to-date release version, see omicsPrint.

Cross omic genetic fingerprinting

Bioconductor version: 3.7

omicsPrint provides functionality for cross omic genetic fingerprinting, for example, to verify sample relationships between multiple omics data types, i.e. genomic, transcriptomic and epigenetic (DNA methylation).

Author: Maarten van Iterson [aut], Davy Cats [cre]

Maintainer: Davy Cats <davycats.dc at>

Citation (from within R, enter citation("omicsPrint")):


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HTML R Script omicsPrint: detection of data linkage errors in multiple omics studies
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biocViews DNAMethylation, Epigenetics, GeneticVariability, Genetics, QualityControl, Software, Transcription, Transcriptomics
Version 1.0.0
License GPL (>= 2)
Depends R (>= 3.5), MASS
Imports methods, matrixStats, graphics, stats, SummarizedExperiment, MultiAssayExperiment, RaggedExperiment
Suggests BiocStyle, knitr, rmarkdown, testthat, GEOquery, VariantAnnotation, Rsamtools, BiocParallel, GenomicRanges, FDb.InfiniumMethylation.hg19, snpStats
Depends On Me
Imports Me
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