miRNAmeConverter

DOI: 10.18129/B9.bioc.miRNAmeConverter    

This package is for version 3.7 of Bioconductor; for the stable, up-to-date release version, see miRNAmeConverter.

Convert miRNA Names to Different miRBase Versions

Bioconductor version: 3.7

Translating mature miRNA names to different miRBase versions, sequence retrieval, checking names for validity and detecting miRBase version of a given set of names (data from http://www.mirbase.org/).

Author: Stefan Haunsberger [aut, cre]

Maintainer: Stefan J. Haunsberger <stefan.haunsberger at gmail.com>

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("miRNAmeConverter")

Documentation

PDF		Reference Manual
Text		NEWS

Details

biocViews	Preprocessing, Software, miRNA
Version	1.8.0
In Bioconductor since	BioC 3.3 (R-3.3) (2.5 years)
License	Artistic-2.0
Depends	miRBaseVersions.db
Imports	DBI, AnnotationDbi, reshape2
LinkingTo
Suggests	methods, testthat, knitr, rmarkdown
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	miRNAmeConverter_1.8.0.tar.gz
Windows Binary	miRNAmeConverter_1.8.0.zip
Mac OS X 10.11 (El Capitan)	miRNAmeConverter_1.8.0.tgz
Source Repository	git clone https://git.bioconductor.org/packages/miRNAmeConverter
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/miRNAmeConverter
Package Short Url	http://bioconductor.org/packages/miRNAmeConverter/
Package Downloads Report	Download Stats