discordant

DOI: 10.18129/B9.bioc.discordant    

This package is for version 3.7 of Bioconductor; for the stable, up-to-date release version, see discordant.

The Discordant Method: A Novel Approach for Differential Correlation

Bioconductor version: 3.7

Discordant is a method to determine differential correlation of molecular feature pairs from -omics data using mixture models. Algorithm is explained further in Siska et al.

Author: Charlotte Siska [cre,aut], Katerina Kechris [aut]

Maintainer: Charlotte Siska <siska.charlotte at gmail.com>

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("discordant")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("discordant")

 

PDF	R Script	Discordant
PDF		Reference Manual
Text		NEWS

Details

biocViews	BiologicalQuestion, Genetics, Microarray, RNASeq, Software, StatisticalMethod, mRNAMicroarray
Version	1.4.0
In Bioconductor since	BioC 3.5 (R-3.4) (1.5 years)
License	GPL (>= 2)
Depends	R (>= 3.4)
Imports	Biobase, stats, biwt, gtools, MASS, tools
LinkingTo
Suggests	BiocStyle, knitr
SystemRequirements
Enhances
URL	https://github.com/siskac/discordant
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	discordant_1.4.0.tar.gz
Windows Binary	discordant_1.4.0.zip (32- & 64-bit)
Mac OS X 10.11 (El Capitan)	discordant_1.4.0.tgz
Source Repository	git clone https://git.bioconductor.org/packages/discordant
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/discordant
Package Short Url	http://bioconductor.org/packages/discordant/
Package Downloads Report	Download Stats