ProCoNA

DOI: 10.18129/B9.bioc.ProCoNA    

This package is for version 3.7 of Bioconductor; for the stable, up-to-date release version, see ProCoNA.

Protein co-expression network analysis (ProCoNA).

Bioconductor version: 3.7

Protein co-expression network construction using peptide level data, with statisical analysis. (Journal of Clinical Bioinformatics 2013, 3:11 doi:10.1186/2043-9113-3-11)

Author: David L Gibbs

Maintainer: David L Gibbs <gibbsd at ohsu.edu>

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("ProCoNA")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("ProCoNA")

 

PDF	R Script	De Novo Peptide Network Example
PDF		Reference Manual
Text		README
Text		NEWS

Details

biocViews	GraphAndNetwork, Proteomics, Software
Version	1.18.0
In Bioconductor since	BioC 2.13 (R-3.0) (5 years)
License	GPL (>= 2)
Depends	R (>= 2.10), methods, WGCNA, MSnbase, flashClust
Imports	BiocGenerics, GOstats
LinkingTo
Suggests	RUnit
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	ProCoNA_1.18.0.tar.gz
Windows Binary	ProCoNA_1.18.0.zip
Mac OS X 10.11 (El Capitan)	ProCoNA_1.18.0.tgz
Source Repository	git clone https://git.bioconductor.org/packages/ProCoNA
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/ProCoNA
Package Short Url	http://bioconductor.org/packages/ProCoNA/
Package Downloads Report	Download Stats