boxPlotD {DAPAR} | R Documentation |
Boxplot for quantitative proteomics data
boxPlotD(qData, dataForXAxis = NULL, labels = NULL, group2Color = "Condition")
qData |
A dataframe that contains quantitative data. |
dataForXAxis |
A vector containing the types of replicates to use as X-axis. Available values are: Label, Bio.Rep, Bio.Rep and Tech.Rep. Default is "Label". |
labels |
A vector of the conditions (labels) (one label per sample). |
group2Color |
A string that indicates how to color the replicates: one color per condition (value "Condition") or one color per replicate (value "Replicate"). Default value is by Condition. |
A boxplot
Florence Combes, Samuel Wieczorek
require(DAPARdata) data(Exp1_R25_pept) qData <- Biobase::exprs(Exp1_R25_pept) types <- c("Label","Bio.Rep") dataForXAxis <- Biobase::pData(Exp1_R25_pept)[,types] labels <- Biobase::pData(Exp1_R25_pept)[,"Label"] boxPlotD(qData, dataForXAxis, labels)