annotateFeatures | Annotating metagenome data with taxonomic information |
annotateFeatures-method | Annotating metagenome data with taxonomic information |
get_gg13.8_85MgDb | MgDb-class object with Greengenes Database Version 13.8 85% OTUs |
mgdb | Metagenome Database class |
MgDb-class | Metagenome Database class |
mgDb_ | MgDb-class accessors |
mgDb_meta | MgDb-class accessors |
mgDb_select | Querying MgDb objects |
mgDb_select-method | Querying MgDb objects |
mgDb_seq | MgDb-class accessors |
mgDb_taxa | MgDb-class accessors |
mgDb_tree | MgDb-class accessors |
mgFeatures | mgFeatures-class constructor |
mgFeatures-class | mgFeature-class object |
mgF_ | mgFeatures accessors |
mgF_meta | mgFeatures accessors |
mgF_seq | mgFeatures accessors |
mgF_taxa | mgFeatures accessors |
mgF_tree | mgFeatures accessors |
mock_mgF | Example mgFeatures class object |
mock_query_df | Example Query Data Frame |
newMgDb | MgDb |
select-method | Querying MgDb objects |
show-method | Display summary of MgDb-class object |
taxa_ | MgDb-class Taxa slot helper functions |
taxa_columns | MgDb-class Taxa slot helper functions |
taxa_columns-method | MgDb-class Taxa slot helper functions |
taxa_keys | MgDb-class Taxa slot helper functions |
taxa_keys-method | MgDb-class Taxa slot helper functions |
taxa_keytypes | MgDb-class Taxa slot helper functions |
taxa_keytypes-method | MgDb-class Taxa slot helper functions |