data structures for linkage disequilibrium measures in populations


[Up] [Top]

Documentation for package ‘ldblock’ version 1.10.0

Help Pages

ldblock-package data structures for linkage disequilibrium measures in populations
downloadPopByChr download hapmap resource with LD estimates
expandSnpSet Given a set of SNP identifiers, use LD to expand the set to include linked loci
hmld import hapmap LD data and create a structure for its management
ldblock data structures for linkage disequilibrium measures in populations
ldByGene obtain LD statistics in region specified by a gene model
ldmat Class '"ldstruct"'
ldmat-method Class '"ldstruct"'
ldstruct-class Class '"ldstruct"'
s3_1kg Create a URL referencing 1000 genomes content in AWS S3
stack1kg Create a URL referencing 1000 genomes content in AWS S3