R interface to epiviz web components


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Documentation for package ‘epivizrChart’ version 1.2.0

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chart_default_settings_colors Get default chart settings and colors
EpivizBlocksTrack Data container for an Epiviz Blocks Track.
EpivizBlocksTrack-class Data container for an Epiviz Blocks Track.
EpivizChart Data container for an Epiviz chart component.
epivizChart Initialize an 'EpivizChart' object to visualize in viewer or knit to HTML.
EpivizChart-class Data container for an Epiviz chart component.
EpivizChartDataMgr Class providing data manager for epiviz charts.
EpivizChartDataMgr-class Class providing data manager for epiviz charts.
EpivizDataSource Data container for an Epiviz Data Source component.
EpivizDataSource-class Data container for an Epiviz Data Source component.
epivizEnv Initialize an 'EpivizEnvironment' object.
EpivizEnvironment Data container for an Epiviz environment component.
EpivizEnvironment-class Data container for an Epiviz environment component.
EpivizGenesTrack Data container for an Epiviz Genes Track.
EpivizGenesTrack-class Data container for an Epiviz Genes Track.
EpivizHeatmapPlot Data container for an Epiviz Heatmap Plot.
EpivizHeatmapPlot-class Data container for an Epiviz Heatmap Plot.
EpivizLinePlot Data container for an Epiviz Line Plot.
EpivizLinePlot-class Data container for an Epiviz Line Plot.
EpivizLineTrack Data container for an Epiviz Line Track.
EpivizLineTrack-class Data container for an Epiviz Line Track.
epivizNav Initialize an 'EpivizNavigation' object to visualize in viewer or knit to HTML.
EpivizNavigation Data container for an Epiviz navigation component.
EpivizNavigation-class Data container for an Epiviz navigation component.
EpivizScatterPlot Data container for an Epiviz Scatter Plot.
EpivizScatterPlot-class Data container for an Epiviz Scatter Plot.
EpivizStackedLinePlot Data container for an Epiviz Stacked Line Plot.
EpivizStackedLinePlot-class Data container for an Epiviz Stacked Line Plot.
EpivizStackedLineTrack Data container for an Epiviz Stacked Line Track.
EpivizStackedLineTrack-class Data container for an Epiviz Stacked Line Track.
EpivizViewComponent Data container for an Epiviz web component.
EpivizViewComponent-class Data container for an Epiviz web component.
EpivizWebComponent Data container for an Epiviz Web component.
EpivizWebComponent-class Data container for an Epiviz Web component.
json_parser JSON parser used by this package
json_writer JSON writer used by this package
rand_id Random ID generator for epiviz charts
tcga_colon_blocks Example methylation data (blocks) for epivizr vignette.
tcga_colon_curves Example methylation data (smoothed methylation levels) for epivizr vignette
tcga_colon_expression Example exon-level RNAseq data from TCGA project for epivizr vignette.