camelSampleTable |
ampliQueso sample data |
camelTest |
camelTest - calculating permutation tests for camel measures (sequential and parallel versions) |
compareCoverages |
compareCoverages - camel measure for a single comparison. |
compareCoveragesReg |
compareCoveragesReg - calculating given camel measures for a list of regions specified by a BED file (sequential and parallel versions) |
getCountTable |
getCountTable - obtaining typical count table. |
getSNP |
getSNP - finding SNPs in all samples for regions specified by a BED file all regions if BED file not provided (sequential and parallel versions) |
ndMax |
ampliQueso sample data |
ndMin |
ampliQueso sample data |
runAQReport |
runAQReport - runing the AmpliQueso report |